{ "_id": "6a17fa3bacfb0bcc41da9b52", "Package": "clusteredMSM", "Type": "Package", "Title": "Nonparametric Analysis of Clustered Multistate Processes", "Version": "0.1.0", "Authors@R": "person(given = \"Giorgos\",\nfamily = \"Bakoyannis\",\nrole = c(\"aut\", \"cre\"),\nemail = \"gbakogia@iu.edu\",\ncomment = c(ORCID = \"0000-0002-2789-2497\"))", "Description": "Nonparametric estimation of population-averaged transition\nprobabilities, with cluster-bootstrap pointwise confidence\nintervals, simultaneous confidence bands, and two-sample\nKolmogorov-Smirnov-type tests for clustered or independent\nmultistate process data. Estimation follows Bakoyannis (2021)\n; two-sample inference for the\ncluster-randomized and independent-samples designs follows\nBakoyannis and Bandyopadhyay (2022)\n. Both methods use the\nworking-independence Aalen-Johansen estimator. The package\nsupports both progressive (acyclic) and non-monotone (e.g.,\nillness-death with recovery) multistate processes, right\ncensoring, left truncation, and informative cluster size. The\nuser supplies data in interval format (one row per\nmutually-exclusive time interval per subject) and interacts\nwith the package through a single formula-based function,\npatp().", "License": "GPL-3", "Encoding": "UTF-8", "LazyData": "true", "VignetteBuilder": "knitr", "Config/testthat/edition": "3", "URL": "https://github.com/gbakoyannis/clusteredMSM", "BugReports": "https://github.com/gbakoyannis/clusteredMSM/issues", "Config/roxygen2/version": "8.0.0", "RoxygenNote": "7.3.3", "Repository": "https://gbakoyannis.r-universe.dev", "Date/Publication": "2026-05-20 02:02:38 UTC", "RemoteUrl": "https://github.com/gbakoyannis/clusteredmsm", "RemoteRef": "HEAD", "RemoteSha": "96de6d1225090939789054df72da4190b1cb713c", "NeedsCompilation": "no", "Packaged": { "Date": "2026-05-28 08:13:41 UTC", "User": "root" }, "Author": "Giorgos Bakoyannis [aut, cre] (ORCID:\n)", "Maintainer": "Giorgos Bakoyannis ", "MD5sum": "b3fa307503989e1714f023aa401c5269", "_user": "gbakoyannis", "_type": "src", "_file": "clusteredMSM_0.1.0.tar.gz", "_fileid": "546d591fa1899b71c6e27a307e6cc077a226d3124e87cc59b3e308bb1fb001f7", "_filesize": 291546, "_sha256": "546d591fa1899b71c6e27a307e6cc077a226d3124e87cc59b3e308bb1fb001f7", "_created": "2026-05-28T08:13:41.000Z", "_published": "2026-05-28T08:18:03.713Z", "_distro": "noble", "_jobs": [ { "job": 78250615468, "time": 209, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "7260983331" }, { "job": 78250615491, "time": 185, "config": "linux-release-x86_64", "r": "4.6.0", "check": "OK", "artifact": "7260975302" }, { "job": 78250615387, "time": 221, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "OK", "artifact": "7260976366" }, { "job": 78250615516, "time": 179, "config": "macos-release-arm64", "r": "4.6.0", "check": "OK", "artifact": "7260967874" }, { "job": 78250088886, "time": 204, "config": "source", "r": "4.6.0", "check": "OK", "artifact": "7260916900" }, { "job": 78250615400, "time": 100, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "7260948715" }, { "job": 78250615410, "time": 186, "config": "windows-devel", "r": "4.7.0", "check": "OK", "artifact": "7260975627" }, { "job": 78250615390, "time": 159, "config": "windows-oldrel", "r": "4.5.3", "check": "OK", "artifact": "7260967363" }, { "job": 78250615574, "time": 160, "config": "windows-release", "r": "4.6.0", "check": "OK", "artifact": "7260968337" } ], "_buildurl": "https://github.com/r-universe/gbakoyannis/actions/runs/26562892681", "_status": "success", "_host": "GitHub-Actions", "_upstream": "https://github.com/gbakoyannis/clusteredmsm", "_commit": { "id": "96de6d1225090939789054df72da4190b1cb713c", "author": "Giorgos Bakoyannis ", "committer": "Giorgos Bakoyannis ", "message": "Update cran-comments.md for resubmission\n\nDocument the win-builder R-devel run (2026-05-20: 0 errors, 0\nwarnings, 1 NOTE), respond to the reviewer's \\dontrun{} comment\n(all examples unwrapped; none needed \\donttest{}), and describe\nthe single NOTE as the standard new-submission flag plus the\nintentional proper-noun/domain-term spellings. Calibration\nsimulation summary retained.\n\nCo-Authored-By: Claude Opus 4.7 (1M context) \n", "time": 1779242558 }, "_maintainer": { "name": "Giorgos Bakoyannis", "email": "gbakogia@iu.edu", "orcid": "0000-0002-2789-2497" }, "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 3.5.0", "role": "Depends" }, { "package": "survival", "role": "Imports" }, { "package": "stats", "role": "Imports" }, { "package": "utils", "role": "Imports" }, { "package": "mstate", "role": "Suggests" }, { "package": "testthat", "version": ">= 3.0.0", "role": "Suggests" }, { "package": "knitr", "role": "Suggests" }, { "package": "rmarkdown", "role": "Suggests" } ], "_owner": "gbakoyannis", "_selfowned": true, "_usedby": 0, "_updates": [ { "week": "2026-19", "n": 13 }, { "week": "2026-20", "n": 16 }, { "week": "2026-21", "n": 2 } ], "_tags": [], "_topics": [ "biostatistics", "clustered-data", "multistate-models", "nonparametric-statistics", "survival-analysis" ], "_stars": 0, "_userbio": { 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